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Guide to Patagonia's Monsters & Mysterious beings

I have written a book on this intriguing subject which has just been published.
In this blog I will post excerpts and other interesting texts on this fascinating subject.

Austin Whittall


Wednesday, November 26, 2025

Patagonian mtDNA is quite unique!


A paper published in 2017 (Diferenciación regional de poblaciones nativas de América a partir del análisis de los linajes maternos, Intersecciones en Antropología 18: 271-282. 2017. ISSN 1666-2105. Josefina María Brenda Motti, Marisol Elisabeth Schwab, Julieta Beltramo, Laura Smeldy Jurado-Medina, Marina Muzzio, Virgina Ramallo, Graciela Bailliet, Claudio Marcelo Bravi), looks into the maternal genetic component of the Native American people of South America, analyzing their mtDNA.


Their data show that Patagonian natives have a unique set of haplotypes not found in the rest of South America. Table 1 in the paper is shown below, with the haplotypes found in Chilean and Argentine Patagonia (it has no data from the Province of Neuquén).


mtDNA frequencies table in Patagonia
Haplogroup frequencies (%). Table 1 in Motti et al. (2017)

The authors point out the high frequency of certain variants in Argentina's Patagonia, namely, B2i2, D1g, D4h3a5 y C1b13. It suggests that the "notable unity" in Patagonia, both in Chile and Argentina with the preponderance of these haplotypes suggests that south of Latitude 40°S, as the Andes are lower in elevation, there could have been west-to-east mobility of migrating groups.


The authors also note that "these lineages are practically exclusive to Patagonia, as they are found at low frequencies in central Argentina, Uruguay, and northern Chile, and are absent from the rest of the continent. The homogeneity on both sides of the Andes Mountains is indicative of common ancestry."


They suggest that D4h3a5 reached the region along the Pacific, while the presence of B2i1 in the Amazon people like the Kayapó, a sister clade to Patagonia's B2i2 suggests the arrival of people along the Atlantic coast of South America.


mtDNA D1g is Ancient


Since D1g is around 18,000 year old, its age could hint that it was among the first to reach the area, followed by younger haplogroups B2i2 y C1b13, aged 10,800 BP and 12,000 BP, respectively. B2i2 is absent in the Island of Tierra del Fuego suggesting that it differentiated later.


Michelle de Saint Pierre (2017) suggested that D1g as well as D4h3a are ancient, and must have been present in the first wave of people to reach America, later overlaid by more recent arrivals. (de Saint Pierre, Antiquity of mtDNA lineage D1g from the southern cone of South America supports pre-Clovis migration. Quaternary International, Vol 444, Part B, 2017, p.19-25, ISSN 1040-6182, https://doi.org/10.1016/j.quaint.2017.05.054.). de Saint Pierre wrote:


"The age calculated for D1g, between 25,000 and 19,000 cal yr BP is extremely old for a South American mitochondrial subhaplogroup. The anomalous age of this haplogroup does not fit the currently accepted framework for the other mtDNA haplogroups in the Americas...
Of the exclusively Amerindian haplogroups, D4h3a has an age of 17.6 kyr. This is a good candidate to date the early peopling, since considerable evidence has shown it to be an ancestral haplogroup. D4h3a has been recovered from the late Pleistocene (12,707e12,556 cal yr BP) Anzick child (Rasmussen et al., 2014) and from a skeleton of an early Holocene individual from Alaska (Kemp et al., 2007), which is empirical evidence of the presence of this lineage in Paleoamericans. Also, D4h3a has a wide geographic distribution, being found low frequencies in populations across the continent, including the most southern native populations, the Patagonians
"


See my post on D1g here, and the post on D4h3a here.


The Amazonian origin of the Mapuches


Back in 2012 (de Saint Pierre M, Gandini F, Perego UA, Bodner M, Gómez-Carballa A, Corach D, et al. (2012) Arrival of Paleo-Indians to the Southern Cone of South America: New Clues from Mitogenomes. PLoS ONE 7(12): e51311. https://doi.org/10.1371/journal.pone.0051311) had found that the sub-haplogroups B2i2 and C1b13 were exclusive to the southern tip of South America and noticed that B2i2 was found at high frequencies among the Mapuche people and related groups like the Pehuenche and Huilliche (26 to 39% frequencies) while admixture led to lower levels among the Tehuelches (14%). It was absent in northern Chile and also among the canoe people of Tierra del Fuego and Southern Chile (who rarely admixed with the Mapuches). Saint Pierre not only found th B2i group among the Amazonian Kayapó, they "identified only two additional mtDNAs, one from Brazil and one from northern Uruguay (both bearing the B2 control-region haplotype plus the B2i diagnostic transitions at np 430 and 485), thus preliminarily suggesting a geographic distribution of B2i1 limited to the northern and eastern part of South America/i>." This is interesting, and it is in line with the notion that the Mapuche originated in the Amazonian region and moved on, later into Chile.


I have posted about a common origin for Mapuche and the Amazonian Guaraní people (and again here), and that the Mapuche were late arrivals in the Patagoian region, so I welcome additional evidence that supports this theory.


Variant C1b13, on the other hand, is found beyond Patagonia, among people like the Atacameño of NW Chile's Atacama desert region, and the Alakaluf and Yamana canoe people, and surely spread to these people from the Mapuche homeland in Central Chile, and is of recent origin there, from an older C1 root.



Patagonian Monsters - Cryptozoology, Myths & legends in Patagonia Copyright 2009-2025 by Austin Whittall © 

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